Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015867373.1_cds_XP_016433097.1_29280
CDS Infomation

[gene=LOC107759631] [db_xref=GeneID:107759631] [protein=ataxin-10-like isoform X2] [protein_id=XP_016433097.1] [location=join(125204..125810,125915..126792)] [gbkey=CDS]
Sequence

ATGGATGATAAATTTGTACCAGAGCTTTCTGTCCCCGAAAATGTTACCAAAACATTATTA
CTTGTGTCAAACTCAGCTTCTTTAGAAAAGGCACTTGAGAAGCTGATAGAAATTGCCAAA
GTTCCTGATAGAAGGTTTGATCTGTCCACTAAGAACGTTGTCACCGCTCTCCTCCAACTC
TGTCAGACTCTGTCATCTCCCTCTTGGCGTTACCTCCTTTTATTGTCTCTTAAGGCACTT
AGAAACATGTGTGCTGGGGAGATAAGAAATCAAAATGCCTTTCTTGAACAAAGAGGAGTT
GAAACAGTCATGGATGTTATTACCTCAGTAGGACTTACTATTGATCCTGATTGTGAGATT
ATCCGAGTGGGGCTGCAACTTCTGGGAAACTACTCAGTAGCTGGGAGAGAACATCAATGT
GATGTGTGGTACCAAATGTTTCCTCATAGATTCTTGAAGATTGCTAGAGTTAGAAGCAGA
GAAATATGTGATCCTCTATGTATGGCCATTTACACTTGCTGTGAAGGTACTGATGGACTG
CTAACAGAGTTAAGTTCGGAGCAAGGGTTGCCGATTCTTAAAGAAATCATATGTACTTCA
TCAGCCGTTGGTCTCAGAGAAGATTGGTTGAAGTTGCTTCTTTCAAAAATTTGCATCGAA
GGCTCCTACTTTTCCTCAATTTTCTTCAAGTTACATTCACATCCTTGTGTTAAGAACAAT
GATATTGTTACACACTTAGCTTACCAATTTGTTAGTGAGCAAGCTCATCTGTTGAGTATC
CTCTCAGAAATCTTGAATGAGCAATTAGAGCATATTGTTGTTTCACATGTTTTTGCTTTA
AGTATCTTCGGGATATTTAAGAGTTCTGCAGTGGTTGTTGACTTTTCAAACAGAGGGAAA
GATGATCTTCCGACGGGGTCTGCTCCTATTGATGTTCTAGGATACTCACTCGTGATCTTG
AGAGATATTTGCGCTTGTGGTCACCTGACAAGCTCTAGGGAGGAAGGTCCAAAGGATGTC
GTGGATATATTAGTTTCCTCTGGGCTTATTGAACTTCTTCTGGACTTACTTCGAAATCTT
GAACCTCCAACGACAATTAGGAAATCAATGACACAGGATCAGATCAAGGAGGCAACATCA
TCTTCGTCATTGAGGTGTTGTCCTTACAAAGGTTTCCGGAGAGATATTGTTGCCATCCTT
GGAAACTGTGCTTATAGTAGAAGGCACGTCCAAGATGAGATTAGAGATAAAAATGGGATC
CTTTTACTGCTACAACAGTGTGTTACAGATGATGATAATCCTTTCTTAAGGGAGTGGGGA
ATCTGGTGTGTGCGAAACCTATTGGAAGGAAATGCAGAAAACCAAGGGGCTGTTGCTGAT
TTAGAGCTTCAAGGAACTGCAGATGTTCCGGAACTTGCTCGACTTGGGCTTCAAGTAGAA
GTTGACCCCAAAACTAGACGTGCAAAGCTAGTAAATGTCGCGTGA

Peptide Sequence

PEP ID

XP_016433097.1
PEP Infomation

PREDICTED: ataxin-10-like isoform X2 [Nicotiana tabacum]
Sequence

MDDKFVPELSVPENVTKTLLLVSNSASLEKALEKLIEIAKVPDRRFDLSTKNVVTALLQL
CQTLSSPSWRYLLLLSLKALRNMCAGEIRNQNAFLEQRGVETVMDVITSVGLTIDPDCEI
IRVGLQLLGNYSVAGREHQCDVWYQMFPHRFLKIARVRSREICDPLCMAIYTCCEGTDGL
LTELSSEQGLPILKEIICTSSAVGLREDWLKLLLSKICIEGSYFSSIFFKLHSHPCVKNN
DIVTHLAYQFVSEQAHLLSILSEILNEQLEHIVVSHVFALSIFGIFKSSAVVVDFSNRGK
DDLPTGSAPIDVLGYSLVILRDICACGHLTSSREEGPKDVVDILVSSGLIELLLDLLRNL
EPPTTIRKSMTQDQIKEATSSSSLRCCPYKGFRRDIVAILGNCAYSRRHVQDEIRDKNGI
LLLLQQCVTDDDNPFLREWGIWCVRNLLEGNAENQGAVADLELQGTADVPELARLGLQVE
VDPKTRRAKLVNVA

Transcript Sequence

Gene sequence data has not been registered.